Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

strain
C57BL/6
age
3 months
sex
male
tissue
liver
sample_type
Tissue chunk
IP
H3K27ac
sample
24

Sequenced DNA Library

library_name
Liver_3m2_K27ac_TGACCA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
30464107
Reads aligned (%)
86.0
Duplicates removed (%)
33.2
Number of peaks
38576 (qval < 1E-05)

mm9

Number of total reads
30464107
Reads aligned (%)
86.0
Duplicates removed (%)
33.3
Number of peaks
38539 (qval < 1E-05)

Base call quality data from DBCLS SRA