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ChIP-Atlas
Peak Browser
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ChIP-Atlas: Peak Browser
Visualizes protein binding on given genomic loci with
IGV genome browser
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Requirements
How to use
How to use (統合TV, Japanese)
H. sapiens (hg19)
H.sapiens (hg38)
M. musculus (mm9)
M. musculus (mm10)
R. norvegicus (rn6)
D. melanogaster (dm3)
D. melanogaster (dm6)
C. elegans (ce10)
C. elegans (ce11)
S. cerevisiae (sacCer3)
Antigen Class
All antigens (61679)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (1645)
Histone (16641)
RNA polymerase (2095)
TFs and others (15217)
Input control (8083)
Unclassified (11403)
No description (6595)
Antigen
All
Cell type Class
All cell types (61679)
["Input control", "Others", "Unclassified", "No description"]
Adipocyte (400)
Blood (14882)
Bone (1201)
Breast (7092)
Cardiovascular (1943)
Digestive tract (4152)
Epidermis (1849)
Gonad (640)
Kidney (3778)
Liver (2541)
Lung (3661)
Muscle (639)
Neural (3597)
Pancreas (786)
Placenta (84)
Pluripotent stem cell (4542)
Prostate (3241)
Uterus (2492)
Others (1653)
Unclassified (1951)
No description (555)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (61679)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (1645)
Histone (16641)
RNA polymerase (2095)
TFs and others (15217)
Input control (8083)
Unclassified (11403)
No description (6595)
Antigen
All
Cell type Class
All cell types (61679)
["Input control", "Others", "Unclassified", "No description"]
Adipocyte (400)
Blood (14882)
Bone (1201)
Breast (7092)
Cardiovascular (1943)
Digestive tract (4152)
Epidermis (1849)
Gonad (640)
Kidney (3778)
Liver (2541)
Lung (3661)
Muscle (639)
Neural (3597)
Pancreas (786)
Placenta (84)
Pluripotent stem cell (4542)
Prostate (3241)
Uterus (2492)
Others (1653)
Unclassified (1951)
No description (555)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (63337)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (1043)
Histone (25779)
RNA polymerase (2486)
TFs and others (13110)
Input control (7560)
Unclassified (10335)
No description (3024)
Antigen
All
Cell type Class
All cell types (63337)
["Input control", "Others", "Unclassified", "No description"]
Adipocyte (693)
Blood (11453)
Bone (199)
Breast (942)
Cardiovascular (2781)
Digestive tract (939)
Embryo (5541)
Embryonic fibroblast (3566)
Epidermis (643)
Gonad (1897)
Kidney (841)
Liver (3825)
Lung (610)
Muscle (1360)
Neural (4390)
Pancreas (477)
Placenta (373)
Pluripotent stem cell (17526)
Prostate (93)
Spleen (180)
Uterus (173)
Others (766)
Unclassified (3308)
No description (761)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (63337)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (1043)
Histone (25779)
RNA polymerase (2486)
TFs and others (13110)
Input control (7560)
Unclassified (10335)
No description (3024)
Antigen
All
Cell type Class
All cell types (63337)
["Input control", "Others", "Unclassified", "No description"]
Adipocyte (693)
Blood (11453)
Bone (199)
Breast (942)
Cardiovascular (2781)
Digestive tract (939)
Embryo (5541)
Embryonic fibroblast (3566)
Epidermis (643)
Gonad (1897)
Kidney (841)
Liver (3825)
Lung (610)
Muscle (1360)
Neural (4390)
Pancreas (477)
Placenta (373)
Pluripotent stem cell (17526)
Prostate (93)
Spleen (180)
Uterus (173)
Others (766)
Unclassified (3308)
No description (761)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (1259)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (12)
Histone (615)
RNA polymerase (33)
TFs and others (235)
Input control (194)
Unclassified (133)
No description (37)
Antigen
All
Cell type Class
All cell types (1259)
["Input control", "Others", "Unclassified", "No description"]
Bone (10)
Breast (4)
Cardiovascular (322)
Digestive tract (64)
Embryo (7)
Epidermis (4)
Gonad (115)
Kidney (8)
Liver (239)
Neural (259)
Pancreas (193)
Placenta (9)
Others (17)
Unclassified (6)
No description (2)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (6787)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (51)
Histone (1751)
RNA polymerase (360)
TFs and others (1792)
Input control (1647)
Unclassified (829)
No description (357)
Antigen
All
Cell type Class
All cell types (6787)
["Input control", "Others", "Unclassified", "No description"]
Adult (1118)
Cell line (2323)
Embryo (1721)
Larvae (934)
Pupae (106)
Unclassified (459)
No description (126)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (6787)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (51)
Histone (1751)
RNA polymerase (360)
TFs and others (1792)
Input control (1647)
Unclassified (829)
No description (357)
Antigen
All
Cell type Class
All cell types (6787)
["Input control", "Others", "Unclassified", "No description"]
Adult (1118)
Cell line (2323)
Embryo (1721)
Larvae (934)
Pupae (106)
Unclassified (459)
No description (126)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (3253)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (115)
Histone (675)
RNA polymerase (118)
TFs and others (1016)
Input control (981)
Unclassified (220)
No description (128)
Antigen
All
Cell type Class
All cell types (3253)
["Input control", "Others", "Unclassified", "No description"]
Adult (915)
Embryo (910)
Larvae (1353)
Unclassified (75)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (3253)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (115)
Histone (675)
RNA polymerase (118)
TFs and others (1016)
Input control (981)
Unclassified (220)
No description (128)
Antigen
All
Cell type Class
All cell types (3253)
["Input control", "Others", "Unclassified", "No description"]
Adult (915)
Embryo (910)
Larvae (1353)
Unclassified (75)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file
Antigen Class
All antigens (8138)
["Input control", "Others", "Unclassified", "No description"]
DNase-seq (9)
Histone (1868)
RNA polymerase (742)
TFs and others (2048)
Input control (1162)
Unclassified (1751)
No description (558)
Antigen
All
Cell type Class
All cell types (8138)
["Input control", "Others", "Unclassified", "No description"]
Yeast strain (4161)
Unclassified (3947)
No description (30)
Cell type
All
Threshold for Significance
ⓘ
50
100
200
500
View on IGV
Error connecting to IGV?
Download BED file