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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K27ac
wikigenes
PDBj
CellType: Precentral gyrus
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX998294
GSM1660045: H3K27ac Human Brain PrecentralGyrus HS3; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K27ac
Cell type
Cell type Class
Neural
Cell type
Precentral gyrus
NA
NA
Attributes by original data submitter
Sample
source_name
Human female precentral gyrus tissue
tissue
Precentral gyrus
gender
female
age
59
Cause of death
Uremic coma, brain tumor
postmortem delay
7.0 hrs
experiment type
ChIP-Seq
chip antibody
H3K27ac (Abcam, ab4729)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Crosslink, Lyse and Immunoprecipitate Illumina Truseq DNA library protocol
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
28744028
Reads aligned (%)
98.8
Duplicates removed (%)
3.8
Number of peaks
25138 (qval < 1E-05)
hg19
Number of total reads
28744028
Reads aligned (%)
98.7
Duplicates removed (%)
3.9
Number of peaks
25092 (qval < 1E-05)
Base call quality data from
DBCLS SRA