Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Neural
Cell type
Precentral gyrus
NA
NA

Attributes by original data submitter

Sample

source_name
Human female precentral gyrus tissue
tissue
Precentral gyrus
gender
female
age
59
Cause of death
Uremic coma, brain tumor
postmortem delay
7.0 hrs
experiment type
ChIP-Seq
chip antibody
H3K27ac (Abcam, ab4729)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Crosslink, Lyse and Immunoprecipitate Illumina Truseq DNA library protocol

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
28744028
Reads aligned (%)
98.8
Duplicates removed (%)
3.8
Number of peaks
25138 (qval < 1E-05)

hg19

Number of total reads
28744028
Reads aligned (%)
98.7
Duplicates removed (%)
3.9
Number of peaks
25092 (qval < 1E-05)

Base call quality data from DBCLS SRA