Antigen

Antigen Class

TFs and others

Antigen

NR3C1

Cell type

Cell type Class

Kidney

Cell type

Podocytes

MeSH Description

Highly differentiated epithelial cells of the visceral layer of BOWMAN CAPSULE of the KIDNEY. They are composed of a cell body with major CELL SURFACE EXTENSIONS and secondary fingerlike extensions called pedicels. They enwrap the KIDNEY GLOMERULUS capillaries with their cell surface extensions forming a filtration structure. The pedicels of neighboring podocytes interdigitate with each other leaving between them filtration slits that are bridged by an extracellular structure impermeable to large macromolecules called the slit diaphragm, and provide the last barrier to protein loss in the KIDNEY.

Sample

source_name

Podocyte

chip antibody

Santa Cruz Biotechnology, sc1003x

treatment

DEX 5 days

tissue

Podocyte

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

libraries were constructed according to the Illumina instruction

Sequencing Platform

instrument_model

HiSeq X Ten

hg38

Number of total reads

28442637

Reads aligned (%)

86.7

Duplicates removed (%)

15.6

Number of peaks

1213 (qval < 1E-05)

hg19

Number of total reads

28442637

Reads aligned (%)

85.7

Duplicates removed (%)

15.8

Number of peaks

729 (qval < 1E-05)