Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Epidermis

Cell type

Keratinocytes

MeSH Description

Epidermal cells which synthesize keratin and undergo characteristic changes as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.

Sample

source_name

human keratinoctyes with control siRNA

cell type

primary human neonatal keratinocytes

knockdown

control

chip antibody

H3K4me1 (Abcam, cat#ab8895, lot#GR114265-2) (Active Motif)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

24795207

Reads aligned (%)

99.2

Duplicates removed (%)

11.1

Number of peaks

5498 (qval < 1E-05)

hg19

Number of total reads

24795207

Reads aligned (%)

98.8

Duplicates removed (%)

11.5

Number of peaks

5523 (qval < 1E-05)