Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR3C1

Cell type

Cell type Class
Adipocyte
Cell type
Adipocytes
MeSH Description
Cells in the body that store FATS, usually in the form of TRIGLYCERIDES. WHITE ADIPOCYTES are the predominant type and found mostly in the abdominal cavity and subcutaneous tissue. BROWN ADIPOCYTES are thermogenic cells that can be found in newborns of some species and hibernating mammals.

Attributes by original data submitter

Sample

source_name
Adipocyte
cell type
hASC-derived adipocytes
chip antibody
GR

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by the submitter

Sequencing Platform

instrument_model
HiSeq X Ten

hg38

Number of total reads
45013198
Reads aligned (%)
85.8
Duplicates removed (%)
62.2
Number of peaks
4866 (qval < 1E-05)

hg19

Number of total reads
45013198
Reads aligned (%)
85.1
Duplicates removed (%)
62.7
Number of peaks
4594 (qval < 1E-05)

Base call quality data from DBCLS SRA