Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MLLT1

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
acute myeloid leukemia
cell line
MV4;11
treatment
1 microM SR-0813
chip antibody
ENL (Cell Signaling Technology, #14893S)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Libraries were prepared with Takara ThruPLEX® DNA-Seq Kit (Cat. No. R400674) according to manufacturer's instructions.

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
29101208
Reads aligned (%)
94.6
Duplicates removed (%)
58.5
Number of peaks
881 (qval < 1E-05)

hg19

Number of total reads
29101208
Reads aligned (%)
93.9
Duplicates removed (%)
60.3
Number of peaks
807 (qval < 1E-05)

Base call quality data from DBCLS SRA