Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pancreas
Cell type
Pancreas
MeSH Description
A nodular organ in the ABDOMEN that contains a mixture of ENDOCRINE GLANDS and EXOCRINE GLANDS. The small endocrine portion consists of the ISLETS OF LANGERHANS secreting a number of hormones into the blood stream. The large exocrine portion (EXOCRINE PANCREAS) is a compound acinar gland that secretes several digestive enzymes into the pancreatic ductal system that empties into the DUODENUM.

Attributes by original data submitter

Sample

breed
C57BL/6
cultivar
C57BL/6
strain
C57BL/6
dev_stage
adult
sex
male
tissue
pancreas
genotype
wild type

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
37150596
Reads aligned (%)
63.2
Duplicates removed (%)
76.5
Number of peaks
16922 (qval < 1E-05)

mm9

Number of total reads
37150596
Reads aligned (%)
63.0
Duplicates removed (%)
76.7
Number of peaks
16930 (qval < 1E-05)

Base call quality data from DBCLS SRA