SRX8857269
PANC1 cJUN rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pancreas
Cell type
PANC-1
Tissue
Pancreas/Duct
Disease
Epithelioid Carcinoma

Attributes by original data submitter

Sample

isolate
not applicable
age
not applicable
biomaterial_provider
ATCC CRL-1469
sex
male
tissue
Pancreatic cancer
cell_line
PANC1
cell_type
Cancer

Sequenced DNA Library

library_name
K002000309_106891
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
43417820
Reads aligned (%)
99.0
Duplicates removed (%)
12.3
Number of peaks
20608 (qval < 1E-05)

hg19

Number of total reads
43417820
Reads aligned (%)
98.4
Duplicates removed (%)
13.8
Number of peaks
20662 (qval < 1E-05)

Base call quality data from DBCLS SRA