Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ep300

Cell type

Cell type Class
Breast
Cell type
3134
Tissue
Mammary
Lineage
cellLine
Description
Mammary

Attributes by original data submitter

Sample

source_name
3134 cells
cell line
3134
cell type
mouse mammary cells
treatment
60 min Dex
replicate
replicate 1
chip antibodies
anti-p300 (EP300)] antibody
chip antibody vendor
a kind gift from Dr. K. Gardner, NCI

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
30461819
Reads aligned (%)
90.4
Duplicates removed (%)
24.1
Number of peaks
21095 (qval < 1E-05)

mm9

Number of total reads
30461819
Reads aligned (%)
90.1
Duplicates removed (%)
24.1
Number of peaks
21134 (qval < 1E-05)

Base call quality data from DBCLS SRA