Antigen

Antigen Class

TFs and others

Antigen

E2F1

Cell type

Cell type Class

Prostate

Cell type

C4-2

Tissue

Prostate

Cell Type

Epithelial

Disease

Prostate Cancer

Sample

source_name

C4-2 cell line

cell line

C4-2 cell line

knockdown

shCon

treatment

72 hrs CDT, 3 hrs 10 nM DHT

chip antibody

E2F1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as previously described (McNair et al 2018) Library prep was performed as previously described (McNair et al 2018)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

30352323

Reads aligned (%)

95.7

Duplicates removed (%)

53.9

Number of peaks

57142 (qval < 1E-05)

hg19

Number of total reads

30352323

Reads aligned (%)

95.3

Duplicates removed (%)

54.8

Number of peaks

56895 (qval < 1E-05)