Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ATF4

Cell type

Cell type Class
Blood
Cell type
HUDEP-2
NA
NA

Attributes by original data submitter

Sample

source_name
erythroid progenitor cells
cell type
umbilical cord derived erythroid progenitor cells
cell line
HUDEP-2
antibody
rabbit anti-ATF4 (CST 11815S)
Stage
Differentiated

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
40997161
Reads aligned (%)
153.1
Duplicates removed (%)
21.0
Number of peaks
690 (qval < 1E-05)

hg38

Number of total reads
40997161
Reads aligned (%)
155.4
Duplicates removed (%)
20.5
Number of peaks
1397 (qval < 1E-05)

Base call quality data from DBCLS SRA