Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOSL2

Cell type

Cell type Class
Lung
Cell type
A549
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
A549_FOSL2_FLAG cells treated with DEX for 12h - rep2
biomaterial_provider
ATCC
time point
12h
cell line
A549
tissue
adenocarcinomic human alveolar basal epithelial

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Harvested plates at timepoints (0, 1, 4, 8, 12) ChIP-seq libraries were prepared using a Kapa Hyper Prep kit.

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg38

Number of total reads
35044743
Reads aligned (%)
99.2
Duplicates removed (%)
12.9
Number of peaks
22149 (qval < 1E-05)

hg19

Number of total reads
35044743
Reads aligned (%)
98.7
Duplicates removed (%)
13.4
Number of peaks
22172 (qval < 1E-05)

Base call quality data from DBCLS SRA