SRX8536118
GSM4613178: NFYB WT; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NFYB

Cell type

Cell type Class
Blood
Cell type
HUDEP-2
NA
NA

Attributes by original data submitter

Sample

source_name
NFYB_WT
cell line
Hudep2
antibody
NFYB

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared using standard reagents from New England BioLabs for Illumina sequencing

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
243880398
Reads aligned (%)
97.6
Duplicates removed (%)
35.9
Number of peaks
15403 (qval < 1E-05)

hg19

Number of total reads
243880398
Reads aligned (%)
96.9
Duplicates removed (%)
36.5
Number of peaks
13730 (qval < 1E-05)

Base call quality data from DBCLS SRA