Antigen

Antigen Class

TFs and others

Antigen

Supt16

Cell type

Cell type Class

Pluripotent stem cell

Cell type

ES cells

NA

NA

Sample

source_name

embryonic stem cells

strain

C57BL/6

cell type

embryonic stem cells

chip antibody

Spt16

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and trancription factor-DNA complexes were isolated with antibody. ChIP DNA libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

29199345

Reads aligned (%)

0.2

Duplicates removed (%)

12.2

Number of peaks

0 (qval < 1E-05)

mm9

Number of total reads

29199345

Reads aligned (%)

0.2

Duplicates removed (%)

11.8

Number of peaks

0 (qval < 1E-05)