Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
WWTR1

Cell type

Cell type Class
Neural
Cell type
GBM
NA
NA

Attributes by original data submitter

Sample

source_name
GBM cells
cell type
GBM stem-like cells
chip antibody
anti-TAZ antibody (Cell Signaling)
treatment
EGF 4 hours

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
MAGnify ChIP system (Invitrogen)

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
47536889
Reads aligned (%)
97.1
Duplicates removed (%)
3.8
Number of peaks
1105 (qval < 1E-05)

hg19

Number of total reads
47536889
Reads aligned (%)
96.5
Duplicates removed (%)
5.1
Number of peaks
1243 (qval < 1E-05)

Base call quality data from DBCLS SRA