Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
Prostatic Neoplasms, Castration-Resistant
MeSH Description
Tumors or cancer of the PROSTATE which can grow in the presence of low or residual amount of androgen hormones such as TESTOSTERONE.

Attributes by original data submitter

Sample

source_name
CRPC PDX
tissue
CRPC pdx
chip antibody
AR
chip antibody vendor
Santa Cruz Biotechnology

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
20000000
Reads aligned (%)
69.3
Duplicates removed (%)
5.1
Number of peaks
8484 (qval < 1E-05)

hg38

Number of total reads
20000000
Reads aligned (%)
70.6
Duplicates removed (%)
4.1
Number of peaks
8483 (qval < 1E-05)

Base call quality data from DBCLS SRA