Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

strain
C57BL/6
age
7-10 weeks
sex
not determined
tissue
bone marrow

Sequenced DNA Library

library_name
Wt H3K4me3 - LPS
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
46383854
Reads aligned (%)
79.9
Duplicates removed (%)
66.0
Number of peaks
555 (qval < 1E-05)

mm9

Number of total reads
46383854
Reads aligned (%)
79.7
Duplicates removed (%)
66.1
Number of peaks
584 (qval < 1E-05)

Base call quality data from DBCLS SRA