Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
Pancreatic ductal adenocarcinoma
NA
NA

Attributes by original data submitter

Sample

source_name
KRAS*-independent iKPC escaper cells
strain
FVB/C57BL/6
cell type
HDAC5-driven PDAC escaper cells
chip-antibody
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
51205049
Reads aligned (%)
98.2
Duplicates removed (%)
8.6
Number of peaks
397 (qval < 1E-05)

mm9

Number of total reads
51205049
Reads aligned (%)
98.0
Duplicates removed (%)
8.6
Number of peaks
352 (qval < 1E-05)

Base call quality data from DBCLS SRA