Antigen

Antigen Class

TFs and others

Antigen

TP63

Cell type

Cell type Class

Digestive tract

Cell type

TE-5

Primary Tissue

Esophagus

Tissue Diagnosis

Carcinoma Squamous Cell

Sample

source_name

TE5_TP63_KD_TP63_ChIP

cell type

esophageal squamous cell carcinoma

antibody

TP63

genotype

TP63_KD

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Standard Illumina library preparation protocol

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

15803356

Reads aligned (%)

85.2

Duplicates removed (%)

3.1

Number of peaks

3728 (qval < 1E-05)

hg19

Number of total reads

15803356

Reads aligned (%)

84.1

Duplicates removed (%)

3.1

Number of peaks

3356 (qval < 1E-05)