Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Bone
Cell type
Intervertebral Disc
MeSH Description
Any of the 23 plates of fibrocartilage found between the bodies of adjacent VERTEBRAE.

Attributes by original data submitter

Sample

isolate
intervertebral discs (IVDs) from the thoracic and lumbar spine of postnatal day
age
postnatal day 20
sex
not applicable
tissue
intervertebral discs (IVDs)

Sequenced DNA Library

library_name
IVD_Chip_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

mm10

Number of total reads
98743816
Reads aligned (%)
98.6
Duplicates removed (%)
29.9
Number of peaks
1738 (qval < 1E-05)

mm9

Number of total reads
98743816
Reads aligned (%)
98.5
Duplicates removed (%)
29.9
Number of peaks
1849 (qval < 1E-05)

Base call quality data from DBCLS SRA