SRX796595
ChIP-seq Rad21 GM2036

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

isolate
NC
age
11
biomaterial_provider
The Children’s Hospital of Philadelphia
sex
female
tissue
skin fibroblast
ethnicity
caucasian
phenotype
Ctrl-2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
54695854
Reads aligned (%)
99.0
Duplicates removed (%)
21.3
Number of peaks
49385 (qval < 1E-05)

hg19

Number of total reads
54695854
Reads aligned (%)
98.5
Duplicates removed (%)
22.0
Number of peaks
50010 (qval < 1E-05)

Base call quality data from DBCLS SRA