SRX796593
ChIP-seq Spt5 CDL006

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

isolate
NC
age
7
biomaterial_provider
The Children’s Hospital of Philadelphia
sex
female
tissue
skin fibroblast
ethnicity
caucasian

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
46909888
Reads aligned (%)
99.5
Duplicates removed (%)
6.6
Number of peaks
14737 (qval < 1E-05)

hg19

Number of total reads
46909888
Reads aligned (%)
99.0
Duplicates removed (%)
7.3
Number of peaks
14711 (qval < 1E-05)

Base call quality data from DBCLS SRA