Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Mnt

Cell type

Cell type Class
Lung
Cell type
Lung tumors
NA
NA

Attributes by original data submitter

Sample

source_name
preSC
genotype
Chga-GFP;Rblox/lox;p53lox/lox;p130lox
transduction
sgRNA control
antibody
MNT Bethyl Labs A303-627A; RRID: AB_11205638

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Cells were crosslinked in formaldehyde and ChIP was performed Libraries were constructed using the NEB Ultra II kit for Illumina

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
16909407
Reads aligned (%)
97.2
Duplicates removed (%)
5.2
Number of peaks
975 (qval < 1E-05)

mm9

Number of total reads
16909407
Reads aligned (%)
97.1
Duplicates removed (%)
5.8
Number of peaks
954 (qval < 1E-05)

Base call quality data from DBCLS SRA