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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: 293
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX7827980
MRE11 ChIP-seq in HEK293T cells with Cas9/cgRNA targeting ACTB | 5 min after activation, replicate 2, raw FASTQ files
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal
Attributes by original data submitter
Sample
isolate
edited cells
age
not applicable
biomaterial_provider
ATCC
sex
female
tissue
not applicable
cell_line
HEK 293T
treatment
mre11_actb_05m_rep2
Sequenced DNA Library
library_name
mre11_actb_05m_rep2_FASTQ
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
31990205
Reads aligned (%)
91.0
Duplicates removed (%)
40.8
Number of peaks
351 (qval < 1E-05)
hg19
Number of total reads
31990205
Reads aligned (%)
90.3
Duplicates removed (%)
41.2
Number of peaks
303 (qval < 1E-05)
Base call quality data from
DBCLS SRA