SRX7713748
GSM4308264: ChIP-seq-SE-Tbrg4-L10-STAT5A rep2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat5a

Cell type

Cell type Class
Breast
Cell type
Mammary glands
NA
NA

Attributes by original data submitter

Sample

source_name
Mammary gland
strain
C57BL/6
developmental stage
Lactation day 10
genotype
Wap-SE-Tbrg4
antibody
STAT5A (Santa Cruz Biotechnology, sc-271542)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries for sequencing were prepared using standard Illumina protocols.

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
30440796
Reads aligned (%)
97.9
Duplicates removed (%)
8.4
Number of peaks
8795 (qval < 1E-05)

mm9

Number of total reads
30440796
Reads aligned (%)
97.7
Duplicates removed (%)
8.4
Number of peaks
9086 (qval < 1E-05)

Base call quality data from DBCLS SRA