Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
primary preB cells_malignant
strain
C57BL/6
tissue
bone marrow
age
10-20 weeks
cell type
primary preB cells from bone-marrow
genotype
Eu-Myc/+
chip antibody
PolR1A

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
30121851
Reads aligned (%)
38.8
Duplicates removed (%)
44.2
Number of peaks
9910 (qval < 1E-05)

mm9

Number of total reads
30121851
Reads aligned (%)
38.6
Duplicates removed (%)
44.6
Number of peaks
9790 (qval < 1E-05)

Base call quality data from DBCLS SRA