Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

H1 human embryonic stem cells (WA01)

tissue

H1 human embryonic stem cells (WA01)

culture

mTESRI, matrigel

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries were prepared according to Illumina's instructions Chromatin was prepared from 3.10E+7 fixed H1 cells sonicated with Covaris Focus ultra-sonicator and KZFP-DNA complexes were isolated by immunoprecipitation with anti-HA antibody

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

43368739

Reads aligned (%)

96.9

Duplicates removed (%)

32.2

Number of peaks

1393 (qval < 1E-05)

hg19

Number of total reads

43368739

Reads aligned (%)

96.1

Duplicates removed (%)

32.7

Number of peaks

897 (qval < 1E-05)