Antigen

Antigen Class

TFs and others

Antigen

SETD1A

Cell type

Cell type Class

Uterus

Cell type

HeLa

Primary Tissue

Cervix

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

HeLa cell

treatment

control shRNA

passages

13-15

chip antibody

Bethyl A300-289A

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP experiments were performed in HeLa cells using the ChIP IP High Sensitivity (Active Motif 53040). ChIP-seq librairies were constructed using the Next Gen DNA Library Kit

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

22127072

Reads aligned (%)

96.8

Duplicates removed (%)

14.6

Number of peaks

2458 (qval < 1E-05)

hg19

Number of total reads

22127072

Reads aligned (%)

95.7

Duplicates removed (%)

19.1

Number of peaks

1568 (qval < 1E-05)