Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
bone marrow
chip ab
none
strain
C57BL6
developmental stage
adult
cell isolation markers
CD4-, CD8-, IL7Ra-, CD11b-, Ly6g-, CD45R-, Ter119-, Sca1-, CD41+, CD61+, cKit-
cell type
megakaryocyte

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
38958125
Reads aligned (%)
96.3
Duplicates removed (%)
11.9
Number of peaks
547 (qval < 1E-05)

mm9

Number of total reads
38958125
Reads aligned (%)
96.0
Duplicates removed (%)
11.9
Number of peaks
609 (qval < 1E-05)

Base call quality data from DBCLS SRA