Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Others
Cell type
Spleen
MeSH Description
An encapsulated lymphatic organ through which venous blood filters.

Attributes by original data submitter

Sample

sample_type
tissue
tissue
spleen
sex
female
dev_stage
adult
age
53 year
donor ID
ENCDO793LXB
lab
Bradley Bernstein, Broad
source
Kristin Ardlie

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
16690896
Reads aligned (%)
98.8
Duplicates removed (%)
5.0
Number of peaks
18776 (qval < 1E-05)

hg19

Number of total reads
16690896
Reads aligned (%)
97.8
Duplicates removed (%)
5.9
Number of peaks
18599 (qval < 1E-05)

Base call quality data from DBCLS SRA