Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Others
Cell type
Thyroid Gland
MeSH Description
A highly vascularized endocrine gland consisting of two lobes joined by a thin band of tissue with one lobe on each side of the TRACHEA. It secretes THYROID HORMONES from the follicular cells and CALCITONIN from the parafollicular cells thereby regulating METABOLISM and CALCIUM level in blood, respectively.

Attributes by original data submitter

Sample

dev stage
adult
sex
male
sample type
tissue
donor ID
ENCDO845WKR
age
37 year
lab
Bradley Bernstein, Broad
tissue
thyroid gland

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
12447797
Reads aligned (%)
98.2
Duplicates removed (%)
10.0
Number of peaks
8461 (qval < 1E-05)

hg19

Number of total reads
12447797
Reads aligned (%)
97.3
Duplicates removed (%)
10.9
Number of peaks
8434 (qval < 1E-05)

Base call quality data from DBCLS SRA