Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

strain
C57BL/6
age
not applicable
biomaterial_provider
not applicable
sex
not applicable
tissue
haematopoietic progenitors
cell_line
primary haematopoietic progenitors
genotype
MLL-AF11

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
19812616
Reads aligned (%)
90.6
Duplicates removed (%)
37.2
Number of peaks
694 (qval < 1E-05)

mm9

Number of total reads
19812616
Reads aligned (%)
90.3
Duplicates removed (%)
37.2
Number of peaks
671 (qval < 1E-05)

Base call quality data from DBCLS SRA