Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc167
cell line
Kc167 cells
developmental stage
embryo
Sex
female
treatment
M1BPKD
chip antibody
CP190

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq was performed as described previously (Bag et al., 2019). ChIP-seq library was performed as described previously (Bag et al., 2019, Matzat et al., 2012).

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm6

Number of total reads
12160834
Reads aligned (%)
68.2
Duplicates removed (%)
55.0
Number of peaks
6968 (qval < 1E-05)

dm3

Number of total reads
12160834
Reads aligned (%)
68.3
Duplicates removed (%)
54.1
Number of peaks
7056 (qval < 1E-05)

Base call quality data from DBCLS SRA