Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
Bone marrow
tissue
Bone marrow
cell type
CD45.2+LKFcgRII/III+CD55-
tumor stage
Leukemia
genotype
KL

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18941577
Reads aligned (%)
96.2
Duplicates removed (%)
26.0
Number of peaks
40382 (qval < 1E-05)

mm9

Number of total reads
18941577
Reads aligned (%)
96.1
Duplicates removed (%)
26.3
Number of peaks
40335 (qval < 1E-05)

Base call quality data from DBCLS SRA