Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa B2 cells
cell line
HeLa
treatment protocol
none
chip antibody
H3K27ac (C15410196, Diagenode)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
31819639
Reads aligned (%)
98.7
Duplicates removed (%)
16.1
Number of peaks
51615 (qval < 1E-05)

hg19

Number of total reads
31819639
Reads aligned (%)
98.5
Duplicates removed (%)
16.4
Number of peaks
51521 (qval < 1E-05)

Base call quality data from DBCLS SRA