SRX7089250
GSM4146465: Histone ChIP-seq from prostate gland (ENCLB846VZG); Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Prostate
Cell type
Prostate gland
NA
NA

Attributes by original data submitter

Sample

sample_type
tissue
tissue
prostate gland
sex
male
dev_stage
adult
age
37 year
donor ID
ENCDO845WKR
lab
Bradley Bernstein, Broad
source
Kristin Ardlie

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
47007528
Reads aligned (%)
95.8
Duplicates removed (%)
8.0
Number of peaks
3001 (qval < 1E-05)

hg19

Number of total reads
47007528
Reads aligned (%)
94.7
Duplicates removed (%)
9.3
Number of peaks
2878 (qval < 1E-05)

Base call quality data from DBCLS SRA