Toggle navigation
Peak Browser
Enrichment Analysis
Diff Analysis
Target Genes
Colocalization
Publications
Docs
Search
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K27me3
wikigenes
PDBj
CellType: Prostate gland
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX7089209
GSM4146424: Histone ChIP-seq from prostate gland (ENCLB692WPZ); Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K27me3
Cell type
Cell type Class
Prostate
Cell type
Prostate gland
NA
NA
Attributes by original data submitter
Sample
sample_type
tissue
tissue
prostate gland
sex
male
dev_stage
adult
age
37 year
donor ID
ENCDO845WKR
lab
Bradley Bernstein, Broad
source
Kristin Ardlie
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
24237261
Reads aligned (%)
98.2
Duplicates removed (%)
3.9
Number of peaks
973 (qval < 1E-05)
hg19
Number of total reads
24237261
Reads aligned (%)
97.1
Duplicates removed (%)
4.9
Number of peaks
1027 (qval < 1E-05)
Base call quality data from
DBCLS SRA