Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Neural

Cell type

Neural progenitor cells

NA

NA

Sample

source_name

Neural progenitor

disease

normal

germ layer

Ectoderm

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

ATAC-seq was carried out as previously described (Buenrostro 2013) and sequenced on an Illumina HiSeq 4000 with 2x100 paired end sequencing.

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

107754424

Reads aligned (%)

42.2

Duplicates removed (%)

32.3

Number of peaks

54790 (qval < 1E-05)

hg19

Number of total reads

107754424

Reads aligned (%)

42.1

Duplicates removed (%)

32.3

Number of peaks

54588 (qval < 1E-05)