Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOXA2

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC HUES64
NA
NA

Attributes by original data submitter

Sample

source_name
HUES64
cell line
HUES64
cell type
HUES64
chip antibody
FOXA2(Santa Cruz,sc-6554 X,C1810)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
31548592
Reads aligned (%)
143.0
Duplicates removed (%)
12.8
Number of peaks
2122 (qval < 1E-05)

hg38

Number of total reads
31548592
Reads aligned (%)
144.4
Duplicates removed (%)
12.4
Number of peaks
2102 (qval < 1E-05)

Base call quality data from DBCLS SRA