Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Neural
Cell type
Neuroepithelial-like stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
NESCs
sample type
ESC-derived neural precursors
cell type
human neuroepithelial-like stem cells (NESCs)
chip antibody
H3K4me3
chip antibody vendor
Abcam

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
28159961
Reads aligned (%)
94.0
Duplicates removed (%)
17.5
Number of peaks
32399 (qval < 1E-05)

hg19

Number of total reads
28159961
Reads aligned (%)
93.5
Duplicates removed (%)
18.4
Number of peaks
32715 (qval < 1E-05)

Base call quality data from DBCLS SRA