SRX6959086
GSM4110241: ChIP NFL OE; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Lung
Cell type
Lung fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
primary human normal lung fibroblast
cell type
primary lung fibroblasts
treatent
JUN overexpression

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
FOR ChIP, Around 10,000,000 cells were used for each chromatin immunoprecipitation.

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
39652811
Reads aligned (%)
96.0
Duplicates removed (%)
31.0
Number of peaks
8320 (qval < 1E-05)

hg19

Number of total reads
39652811
Reads aligned (%)
95.0
Duplicates removed (%)
31.5
Number of peaks
7669 (qval < 1E-05)

Base call quality data from DBCLS SRA