Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Embryo
Cell type
Embryonic gonad
NA
NA

Attributes by original data submitter

Sample

source_name
genital tubercule
genotype
del(V)
developmental stage
E13.5
strain
CBA / C57BL/6 mix

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
49705132
Reads aligned (%)
63.9
Duplicates removed (%)
51.9
Number of peaks
21181 (qval < 1E-05)

mm9

Number of total reads
49705132
Reads aligned (%)
63.9
Duplicates removed (%)
51.9
Number of peaks
21153 (qval < 1E-05)

Base call quality data from DBCLS SRA