Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
iSLK
NA
NA

Attributes by original data submitter

Sample

source_name
SLK cell line
hci_id
11237X2
knockdown
CTCF KD
antibody
input

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
27892765
Reads aligned (%)
96.5
Duplicates removed (%)
3.1
Number of peaks
984 (qval < 1E-05)

hg19

Number of total reads
27892765
Reads aligned (%)
95.5
Duplicates removed (%)
4.4
Number of peaks
1122 (qval < 1E-05)

Base call quality data from DBCLS SRA