Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
TcellsCD4+
cell line
none
inhibitor treatment
iBET-BD2
stimulation
anti-CD3/CD28
stimulation protocol
4 hours of anti CD3/CD8 after 30 minutes of pretreatment
antibody
BRD3(Bethyl; A302-368A)
replicate
1

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
15638581
Reads aligned (%)
95.3
Duplicates removed (%)
4.9
Number of peaks
657 (qval < 1E-05)

hg19

Number of total reads
15638581
Reads aligned (%)
94.7
Duplicates removed (%)
6.2
Number of peaks
659 (qval < 1E-05)

Base call quality data from DBCLS SRA