Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Neural

Cell type

Prefrontal Cortex

MeSH Description

The rostral part of the frontal lobe, bounded by the inferior precentral fissure in humans, which receives projection fibers from the MEDIODORSAL NUCLEUS OF THE THALAMUS. The prefrontal cortex receives afferent fibers from numerous structures of the DIENCEPHALON; MESENCEPHALON; and LIMBIC SYSTEM as well as cortical afferents of visual, auditory, and somatic origin.

Sample

source_name

Human Prefrontal Cortex

tissue

Human Prefrontal Cortex

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

NEBNext High-Fidelity PCR (NEB)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

52090561

Reads aligned (%)

50.8

Duplicates removed (%)

28.1

Number of peaks

2275 (qval < 1E-05)

hg19

Number of total reads

52090561

Reads aligned (%)

50.5

Duplicates removed (%)

28.3

Number of peaks

2217 (qval < 1E-05)