Antigen

Antigen Class

TFs and others

Antigen

ARNT

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

MCF7_aza_HIF1bChIPseq

tissue source

breast

cell line

MCF7

cell type

Breast cancer cell line

treatment

1 µM aza 72h, 0.5% O2 16h

type of sample

ChIP

chip antibody

ARNT/HIF-1β monoclonal antibody (NB100-124, Novus)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

6251267

Reads aligned (%)

17.4

Duplicates removed (%)

28.1

Number of peaks

859 (qval < 1E-05)

hg19

Number of total reads

6251267

Reads aligned (%)

17.3

Duplicates removed (%)

28.4

Number of peaks

858 (qval < 1E-05)