SRX683679
C2C12 k36me3 silence GTTTCG L007 R1 001.fastq.gz

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

breed
C3H
strain
C3H
age
NA
biomaterial_provider
ATCC
sex
NA
tissue
muscle
cell_line
C2C12
cell_type
myoblast
treatment
siZBED6

Sequenced DNA Library

library_name
C2C12_k36me3_silence_GTTTCG_L007_R1_001.fastq.gz
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
11187688
Reads aligned (%)
95.7
Duplicates removed (%)
17.4
Number of peaks
167 (qval < 1E-05)

mm9

Number of total reads
11187688
Reads aligned (%)
95.4
Duplicates removed (%)
17.6
Number of peaks
284 (qval < 1E-05)

Base call quality data from DBCLS SRA