Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Digestive tract
Cell type
Small intestine lamina propria
NA
NA

Attributes by original data submitter

Sample

source_name
WT DN ILC3
strain background
C57Bl/6
genotype/variation
WT
age
adult
tissue
small intestine lamina propria
cell type
DN ILC3

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
46570067
Reads aligned (%)
98.4
Duplicates removed (%)
30.0
Number of peaks
46918 (qval < 1E-05)

mm9

Number of total reads
46570067
Reads aligned (%)
98.3
Duplicates removed (%)
30.0
Number of peaks
46916 (qval < 1E-05)

Base call quality data from DBCLS SRA