Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Spleen
strain
C57BL/6
tissue
Spleen
celltype
CD4+ Foxp3/RFP- CD62L- IL21/GFP- PD1- CXCR5-
genotype
Foxp3/RFP x IL21/GFP

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
16333109
Reads aligned (%)
74.0
Duplicates removed (%)
14.0
Number of peaks
3089 (qval < 1E-05)

mm9

Number of total reads
16333109
Reads aligned (%)
73.9
Duplicates removed (%)
14.1
Number of peaks
3091 (qval < 1E-05)

Base call quality data from DBCLS SRA